Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Mir1901-201ENSMUST00000122616 78 ntBASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Gm9358-201ENSMUST00000183067 927 ntBASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Gm28388-201ENSMUST00000186262 437 ntBASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Gm8342-201ENSMUST00000209839 757 ntBASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.3□□□□□ -0.28
Scn3aA2ASI5 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn3aA2ASI5 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Gm9645-201ENSMUST00000197131 792 ntBASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Gm38314-201ENSMUST00000195709 625 ntBASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Gm6722-201ENSMUST00000221586 390 ntBASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Scn3aA2ASI5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms