Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Gm4875-201ENSMUST00000118257 786 ntBASIC10.87□□□□□ -0.67
Smim17A0A504 Gm14704-201ENSMUST00000120300 874 ntBASIC10.87□□□□□ -0.67
Smim17A0A504 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.87□□□□□ -0.67
Smim17A0A504 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.87□□□□□ -0.67
Smim17A0A504 Gm28693-202ENSMUST00000190758 331 ntBASIC10.87□□□□□ -0.67
Smim17A0A504 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.87□□□□□ -0.67
Smim17A0A504 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.87□□□□□ -0.67
Smim17A0A504 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.87□□□□□ -0.67
Smim17A0A504 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Smim17A0A504 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Smim17A0A504 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Smim17A0A504 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim17A0A504 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.86□□□□□ -0.67
Smim17A0A504 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.86□□□□□ -0.67
Smim17A0A504 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.86□□□□□ -0.67
Smim17A0A504 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.86□□□□□ -0.67
Smim17A0A504 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smim17A0A504 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.86□□□□□ -0.67
Smim17A0A504 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.86□□□□□ -0.67
Smim17A0A504 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Gm38294-201ENSMUST00000192831 381 ntBASIC10.86□□□□□ -0.67
Smim17A0A504 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.86□□□□□ -0.67
Smim17A0A504 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Smim17A0A504 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.86□□□□□ -0.67
Smim17A0A504 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Smim17A0A504 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Smim17A0A504 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.86□□□□□ -0.67
Smim17A0A504 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smim17A0A504 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.86□□□□□ -0.67
Smim17A0A504 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.86□□□□□ -0.67
Smim17A0A504 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Smim17A0A504 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.86□□□□□ -0.67
Smim17A0A504 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.86□□□□□ -0.67
Smim17A0A504 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim17A0A504 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Smim17A0A504 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smim17A0A504 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim17A0A504 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim17A0A504 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim17A0A504 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smim17A0A504 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim17A0A504 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
Smim17A0A504 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.85□□□□□ -0.67
Smim17A0A504 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smim17A0A504 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Smim17A0A504 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Smim17A0A504 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smim17A0A504 Gm23935-201ENSMUST00000102303 57 ntBASIC10.85□□□□□ -0.67
Smim17A0A504 Gm24270-201ENSMUST00000102326 57 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms