Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm14999-201ENSMUST00000121039 624 ntBASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gm25261-201ENSMUST00000157416 134 ntBASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gm45784-201ENSMUST00000188360 142 ntBASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Gm10434-201ENSMUST00000101158 471 ntBASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Gm39404-201ENSMUST00000216350 313 ntBASIC10.86□□□□□ -0.67
H2afb3S4R1G7 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb3S4R1G7 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms