Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm9230-201ENSMUST00000188228 532 ntBASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Gm31256-201ENSMUST00000194705 506 ntBASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Gm21769-201ENSMUST00000211922 111 ntBASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldn9Q9Z0S7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cldn9Q9Z0S7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Cldn9Q9Z0S7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gm23270-201ENSMUST00000104055 131 ntBASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gm11930-201ENSMUST00000117788 190 ntBASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gm17931-201ENSMUST00000208132 634 ntBASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Cldn9Q9Z0S7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms