Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Paupar-201ENSMUST00000194826 3482 ntBASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm5523-201ENSMUST00000180415 997 ntBASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm37246-201ENSMUST00000192665 835 ntBASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm45575-201ENSMUST00000210283 548 ntBASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.51□□□□□ -0.41
Smarcb1Q9Z0H3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm22334-201ENSMUST00000158070 133 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Mir1943-201ENSMUST00000158276 73 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm5714-201ENSMUST00000197343 566 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm42599-201ENSMUST00000201308 469 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcb1Q9Z0H3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms