Protein–RNA interactions for Protein: Q9WV85

Nme3, Nucleoside diphosphate kinase 3, mousemouse

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nme3Q9WV85 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.31□□□□□ -0.44
Nme3Q9WV85 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.31□□□□□ -0.44
Nme3Q9WV85 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Gm9368-201ENSMUST00000219348 831 ntBASIC12.31□□□□□ -0.44
Nme3Q9WV85 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.31□□□□□ -0.44
Nme3Q9WV85 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.31□□□□□ -0.44
Nme3Q9WV85 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nme3Q9WV85 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.3□□□□□ -0.44
Nme3Q9WV85 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.3□□□□□ -0.44
Nme3Q9WV85 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Gm8712-201ENSMUST00000221090 701 ntBASIC12.3□□□□□ -0.44
Nme3Q9WV85 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.3□□□□□ -0.44
Nme3Q9WV85 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.3□□□□□ -0.44
Nme3Q9WV85 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.3□□□□□ -0.44
Nme3Q9WV85 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nme3Q9WV85 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Gm23270-201ENSMUST00000104055 131 ntBASIC12.29□□□□□ -0.44
Nme3Q9WV85 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Gm18711-201ENSMUST00000199341 750 ntBASIC12.29□□□□□ -0.44
Nme3Q9WV85 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.29□□□□□ -0.44
Nme3Q9WV85 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.29□□□□□ -0.44
Nme3Q9WV85 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.29□□□□□ -0.44
Nme3Q9WV85 Gm10312-201ENSMUST00000078515 489 ntBASIC12.29□□□□□ -0.44
Nme3Q9WV85 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.29□□□□□ -0.44
Nme3Q9WV85 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nme3Q9WV85 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms