Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm24845-201ENSMUST00000158034 109 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm42937-201ENSMUST00000197360 752 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm43758-201ENSMUST00000199500 367 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm7783-201ENSMUST00000204795 781 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Gm3096-201ENSMUST00000185770 364 ntBASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Olfr582-201ENSMUST00000098212 960 ntBASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Prpf40aQ9R1C7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm23270-201ENSMUST00000104055 131 ntBASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm24255-201ENSMUST00000104481 128 ntBASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm18351-201ENSMUST00000188646 883 ntBASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm10312-201ENSMUST00000078515 489 ntBASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm9519-201ENSMUST00000206108 1337 ntBASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Prpf40aQ9R1C7 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms