Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm11597-201ENSMUST00000121423 964 ntBASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Mir8102-201ENSMUST00000184148 139 ntBASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm18304-201ENSMUST00000189162 546 ntBASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm6007-201ENSMUST00000208170 823 ntBASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf4Q9QZS2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Gm12341-201ENSMUST00000119724 503 ntBASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Gm43433-201ENSMUST00000196573 481 ntBASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Gm19220-201ENSMUST00000222682 803 ntBASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf4Q9QZS2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf4Q9QZS2 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf4Q9QZS2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf4Q9QZS2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf4Q9QZS2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf4Q9QZS2 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf4Q9QZS2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms