Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gm25214-201ENSMUST00000104573 129 ntBASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gm2546-201ENSMUST00000182630 991 ntBASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gm39404-201ENSMUST00000216350 313 ntBASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm38341-201ENSMUST00000195357 515 ntBASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a2Q9JLR1 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms