Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gm2383-201ENSMUST00000181461 807 ntBASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gm6114-201ENSMUST00000182472 968 ntBASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gm2260-201ENSMUST00000184965 657 ntBASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gm18212-201ENSMUST00000211678 889 ntBASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gm8385-201ENSMUST00000058999 643 ntBASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk3aQ9JKX8 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gm43184-201ENSMUST00000197247 542 ntBASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gm9797-202ENSMUST00000218003 294 ntBASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms