Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim39Q9ESN2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Gm14913-201ENSMUST00000120011 1093 ntBASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Mir1982-201ENSMUST00000157368 74 ntBASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim39Q9ESN2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Gm6222-202ENSMUST00000182143 629 ntBASIC11.36□□□□□ -0.59
Trim39Q9ESN2 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Gm24526-201ENSMUST00000082921 158 ntBASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim39Q9ESN2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms