Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lima1Q9ERG0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lima1Q9ERG0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lima1Q9ERG0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.9□□□□□ -0.51
Lima1Q9ERG0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gm11964-201ENSMUST00000120982 444 ntBASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Mir1982-201ENSMUST00000157368 74 ntBASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gm27243-201ENSMUST00000183964 521 ntBASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gm43433-201ENSMUST00000196573 481 ntBASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lima1Q9ERG0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Gm11425-201ENSMUST00000119608 498 ntBASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Gm12502-201ENSMUST00000120197 444 ntBASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Gm7809-201ENSMUST00000153199 742 ntBASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Gm16379-201ENSMUST00000161469 348 ntBASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Gm3890-201ENSMUST00000182416 207 ntBASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Gm8762-201ENSMUST00000193486 339 ntBASIC11.88□□□□□ -0.51
Lima1Q9ERG0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Gm9396-201ENSMUST00000076703 567 ntBASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lima1Q9ERG0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms