Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Gm14644-201ENSMUST00000116671 647 ntBASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Gm45865-201ENSMUST00000211815 945 ntBASIC12.53□□□□□ -0.4
Cpne8Q9DC53 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne8Q9DC53 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne8Q9DC53 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm26956-201ENSMUST00000182176 986 ntBASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.52□□□□□ -0.41
Cpne8Q9DC53 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gzmn-202ENSMUST00000225535 989 ntBASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne8Q9DC53 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne8Q9DC53 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.51□□□□□ -0.41
Cpne8Q9DC53 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne8Q9DC53 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne8Q9DC53 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne8Q9DC53 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.51□□□□□ -0.41
Cpne8Q9DC53 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms