Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf6Q9DBU5 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.93□□□□□ -0.34
Rnf6Q9DBU5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.93□□□□□ -0.34
Rnf6Q9DBU5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf6Q9DBU5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf6Q9DBU5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf6Q9DBU5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.93□□□□□ -0.34
Rnf6Q9DBU5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf6Q9DBU5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Gm5455-201ENSMUST00000058710 715 ntBASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf6Q9DBU5 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Gm13350-201ENSMUST00000120519 479 ntBASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Gm7584-201ENSMUST00000175829 940 ntBASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Gm9136-201ENSMUST00000193368 454 ntBASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Gm43962-201ENSMUST00000203898 190 ntBASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Gm4607-201ENSMUST00000206649 577 ntBASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Rnf6Q9DBU5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.9□□□□□ -0.34
Rnf6Q9DBU5 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf6Q9DBU5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms