Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chmp2aQ9DB34 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chmp2aQ9DB34 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Chmp2aQ9DB34 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Chmp2aQ9DB34 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Gm13665-201ENSMUST00000120830 528 ntBASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Gm19187-201ENSMUST00000206781 892 ntBASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Chmp2aQ9DB34 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Gm23912-201ENSMUST00000104687 87 ntBASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Gm32999-201ENSMUST00000192693 562 ntBASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2aQ9DB34 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms