Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Upk1aQ9D132 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Upk1aQ9D132 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Upk1aQ9D132 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Upk1aQ9D132 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.39□□□□□ -0.59
Upk1aQ9D132 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.39□□□□□ -0.59
Upk1aQ9D132 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Gm12390-201ENSMUST00000117897 397 ntBASIC11.39□□□□□ -0.59
Upk1aQ9D132 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.39□□□□□ -0.59
Upk1aQ9D132 Gm11591-201ENSMUST00000120063 702 ntBASIC11.39□□□□□ -0.59
Upk1aQ9D132 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Gm43818-201ENSMUST00000200605 466 ntBASIC11.39□□□□□ -0.59
Upk1aQ9D132 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.39□□□□□ -0.59
Upk1aQ9D132 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.39□□□□□ -0.59
Upk1aQ9D132 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk1aQ9D132 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Upk1aQ9D132 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.39□□□□□ -0.59
Upk1aQ9D132 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.38□□□□□ -0.59
Upk1aQ9D132 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Gm14441-201ENSMUST00000121960 540 ntBASIC11.38□□□□□ -0.59
Upk1aQ9D132 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Gm6222-202ENSMUST00000182143 629 ntBASIC11.38□□□□□ -0.59
Upk1aQ9D132 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Gm18584-201ENSMUST00000203098 964 ntBASIC11.38□□□□□ -0.59
Upk1aQ9D132 Gm17931-201ENSMUST00000208132 634 ntBASIC11.38□□□□□ -0.59
Upk1aQ9D132 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.38□□□□□ -0.59
Upk1aQ9D132 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms