Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Chaf1bQ9D0N7 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chaf1bQ9D0N7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chaf1bQ9D0N7 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chaf1bQ9D0N7 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gm11918-201ENSMUST00000121660 179 ntBASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gm5866-201ENSMUST00000177881 973 ntBASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gm18304-201ENSMUST00000189162 546 ntBASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gm45384-201ENSMUST00000210451 277 ntBASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.3□□□□□ -0.6
Chaf1bQ9D0N7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Gm29705-201ENSMUST00000212598 474 ntBASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.29□□□□□ -0.6
Chaf1bQ9D0N7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms