Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm27341-201ENSMUST00000183570 106 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm29615-201ENSMUST00000185371 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm28224-201ENSMUST00000186078 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm29001-201ENSMUST00000186177 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm28292-201ENSMUST00000186593 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm28101-201ENSMUST00000187608 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm29076-201ENSMUST00000187689 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm28302-201ENSMUST00000187931 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm28646-201ENSMUST00000188220 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm28205-201ENSMUST00000189177 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm29032-201ENSMUST00000189797 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm28695-201ENSMUST00000190300 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm37448-201ENSMUST00000192795 697 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Rps4l-202ENSMUST00000204242 789 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ssbp3Q9D032 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Gm44882-201ENSMUST00000205702 802 ntBASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ssbp3Q9D032 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms