Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gm16177-201ENSMUST00000120728 718 ntBASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gm27243-201ENSMUST00000183964 521 ntBASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gm38092-201ENSMUST00000195600 653 ntBASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gm5904-201ENSMUST00000210286 865 ntBASIC11.41□□□□□ -0.58
Ska1Q9CPV1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.41□□□□□ -0.58
Ska1Q9CPV1 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska1Q9CPV1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Gm17150-201ENSMUST00000165577 381 ntBASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Gm18584-201ENSMUST00000203098 964 ntBASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Gm40466-201ENSMUST00000212174 422 ntBASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska1Q9CPV1 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ska1Q9CPV1 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms