Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Gm26232-201ENSMUST00000083360 166 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Gm11803-201ENSMUST00000119966 444 ntBASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Gm12138-201ENSMUST00000122180 951 ntBASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.86□□□□□ -0.67
Krt88Q9CPR6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.86□□□□□ -0.67
Krt88Q9CPR6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Gm45668-201ENSMUST00000211271 493 ntBASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.86□□□□□ -0.67
Krt88Q9CPR6 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Krt88Q9CPR6 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Gm23912-201ENSMUST00000104687 87 ntBASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms