Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim8Q99PJ2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Trim8Q99PJ2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Gm8738-201ENSMUST00000172606 329 ntBASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Gm29649-201ENSMUST00000185649 419 ntBASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.83□□□□□ -0.52
Trim8Q99PJ2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim8Q99PJ2 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Gm1335-201ENSMUST00000121653 386 ntBASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Gm26927-201ENSMUST00000182385 965 ntBASIC11.82□□□□□ -0.52
Trim8Q99PJ2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Gm44405-201ENSMUST00000198952 126 ntBASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms