Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gm29067-201ENSMUST00000190821 470 ntBASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gm29808-201ENSMUST00000194419 468 ntBASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 AC156790.2-201ENSMUST00000227115 568 ntBASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 n-R5s71-201ENSMUST00000093668 119 ntBASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 AC137950.2-202ENSMUST00000227150 1635 ntBASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Gm6158-201ENSMUST00000109467 904 ntBASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Gm15136-201ENSMUST00000120552 533 ntBASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Gm13827-201ENSMUST00000148801 372 ntBASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Gm45481-201ENSMUST00000209717 877 ntBASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Gm42432-201ENSMUST00000197902 1617 ntBASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh15Q99PJ1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm27826-201ENSMUST00000175282 255 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 CT025603.1-201ENSMUST00000224040 448 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm1826-201ENSMUST00000118646 1162 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm20781-201ENSMUST00000193154 693 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Gm21736-201ENSMUST00000195399 693 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 AC152169.1-201ENSMUST00000223901 701 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 CT010480.2-201ENSMUST00000225424 737 ntBASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh15Q99PJ1 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms