Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Clp1Q99LI9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Gm43452-201ENSMUST00000201873 991 ntBASIC12.71□□□□□ -0.37
Clp1Q99LI9 Gm45120-201ENSMUST00000208880 408 ntBASIC12.71□□□□□ -0.37
Clp1Q99LI9 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.71□□□□□ -0.37
Clp1Q99LI9 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Gm23680-201ENSMUST00000083162 164 ntBASIC12.71□□□□□ -0.37
Clp1Q99LI9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clp1Q99LI9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Clp1Q99LI9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clp1Q99LI9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clp1Q99LI9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Clp1Q99LI9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Clp1Q99LI9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clp1Q99LI9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clp1Q99LI9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clp1Q99LI9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clp1Q99LI9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm7150-201ENSMUST00000122032 981 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm24398-201ENSMUST00000157870 109 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm15744-201ENSMUST00000161734 213 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm9630-201ENSMUST00000178304 885 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm38151-201ENSMUST00000195085 289 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm8342-201ENSMUST00000209839 757 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 Gm5451-201ENSMUST00000080545 579 ntBASIC12.7□□□□□ -0.38
Clp1Q99LI9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clp1Q99LI9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms