Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm6334-201ENSMUST00000207083 228 ntBASIC12.73□□□□□ -0.37
Usp11Q99K46 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.73□□□□□ -0.37
Usp11Q99K46 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Usp11Q99K46 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usp11Q99K46 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Usp11Q99K46 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm11597-201ENSMUST00000121423 964 ntBASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm2991-201ENSMUST00000173338 480 ntBASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.72□□□□□ -0.37
Usp11Q99K46 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm3961-201ENSMUST00000204425 994 ntBASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm45865-201ENSMUST00000211815 945 ntBASIC12.72□□□□□ -0.37
Usp11Q99K46 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.72□□□□□ -0.37
Usp11Q99K46 Cts7-204ENSMUST00000225321 1257 ntBASIC12.72□□□□□ -0.37
Usp11Q99K46 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp11Q99K46 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp11Q99K46 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp11Q99K46 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp11Q99K46 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Usp11Q99K46 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 Gm24231-201ENSMUST00000104315 133 ntBASIC12.71□□□□□ -0.37
Usp11Q99K46 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 Gm14723-201ENSMUST00000118686 215 ntBASIC12.71□□□□□ -0.37
Usp11Q99K46 Gm11222-201ENSMUST00000119005 738 ntBASIC12.71□□□□□ -0.37
Usp11Q99K46 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.71□□□□□ -0.37
Usp11Q99K46 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.71□□□□□ -0.37
Usp11Q99K46 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Usp11Q99K46 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.71□□□□□ -0.37
Usp11Q99K46 Gm5950-201ENSMUST00000213337 772 ntBASIC12.71□□□□□ -0.37
Usp11Q99K46 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp11Q99K46 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp11Q99K46 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp11Q99K46 Olfr582-201ENSMUST00000098212 960 ntBASIC12.71□□□□□ -0.37
Usp11Q99K46 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.71□□□□□ -0.37
Usp11Q99K46 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp11Q99K46 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp11Q99K46 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.71□□□□□ -0.38
Usp11Q99K46 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp11Q99K46 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp11Q99K46 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp11Q99K46 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp11Q99K46 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp11Q99K46 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp11Q99K46 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp11Q99K46 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp11Q99K46 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms