Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Gm27839-201ENSMUST00000184242 106 ntBASIC12.15□□□□□ -0.46
Cdk9Q99J95 Gm27486-201ENSMUST00000184923 80 ntBASIC12.15□□□□□ -0.46
Cdk9Q99J95 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.15□□□□□ -0.46
Cdk9Q99J95 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Gm44882-201ENSMUST00000205702 802 ntBASIC12.15□□□□□ -0.46
Cdk9Q99J95 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.15□□□□□ -0.46
Cdk9Q99J95 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdk9Q99J95 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.15□□□□□ -0.47
Cdk9Q99J95 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Cdk9Q99J95 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdk9Q99J95 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdk9Q99J95 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Snord83b-201ENSMUST00000104546 94 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm8213-201ENSMUST00000118191 441 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm13829-201ENSMUST00000119600 138 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm10156-201ENSMUST00000122364 462 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm24136-201ENSMUST00000083374 165 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.14□□□□□ -0.47
Cdk9Q99J95 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdk9Q99J95 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Gm11814-201ENSMUST00000119515 929 ntBASIC12.13□□□□□ -0.47
Cdk9Q99J95 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.13□□□□□ -0.47
Cdk9Q99J95 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms