Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm38014-201ENSMUST00000193349 2612 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm11793-201ENSMUST00000120433 981 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm14413-201ENSMUST00000122158 408 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 A930019D19Rik-201ENSMUST00000135360 958 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm26069-201ENSMUST00000157497 277 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm24548-201ENSMUST00000158650 108 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm43118-201ENSMUST00000199149 775 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm6007-201ENSMUST00000208170 823 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Vmn1r41-204ENSMUST00000227039 985 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Vmn1r41-205ENSMUST00000227630 827 ntBASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb20Q91XZ9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb20Q91XZ9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb20Q91XZ9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb20Q91XZ9 Gm44792-201ENSMUST00000207008 1628 ntBASIC12.33□□□□□ -0.43
Pcdhb20Q91XZ9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.33□□□□□ -0.43
Pcdhb20Q91XZ9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm12387-201ENSMUST00000118573 955 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm12502-201ENSMUST00000120197 444 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm13676-201ENSMUST00000122185 591 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm23116-201ENSMUST00000158481 67 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm6586-201ENSMUST00000167028 643 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm17164-201ENSMUST00000169013 506 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms