Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gm10012-201ENSMUST00000078252 192 ntBASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Gm13226-201ENSMUST00000117838 404 ntBASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Gm20177-201ENSMUST00000203705 334 ntBASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Gm38325-201ENSMUST00000194507 1377 ntBASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb3Q91XZ7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Pcdhb3Q91XZ7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb3Q91XZ7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Pcdhb3Q91XZ7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb3Q91XZ7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb3Q91XZ7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb3Q91XZ7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb3Q91XZ7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb3Q91XZ7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm9630-201ENSMUST00000178304 885 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm45784-201ENSMUST00000188360 142 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm29608-201ENSMUST00000190444 463 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 AC117797.1-201ENSMUST00000223977 695 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 AC133598.4-201ENSMUST00000224577 454 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms