Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Gm4768-201ENSMUST00000206199 686 ntBASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Gm29705-201ENSMUST00000212598 474 ntBASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh18Q8VHR0 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Gm11478-201ENSMUST00000117851 599 ntBASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Gm24644-201ENSMUST00000157114 139 ntBASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Gm27331-201ENSMUST00000183705 60 ntBASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Gm27839-201ENSMUST00000184242 106 ntBASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh18Q8VHR0 Gm19163-201ENSMUST00000223313 780 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms