Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.04□□□□□ -0.64
Nkd2Q8VE28 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd2Q8VE28 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Gm13875-201ENSMUST00000120162 282 ntBASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Gm12566-201ENSMUST00000121479 359 ntBASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Gm12291-201ENSMUST00000121627 311 ntBASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Gm27023-201ENSMUST00000182372 285 ntBASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Mir6927-201ENSMUST00000184494 71 ntBASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Gm44651-201ENSMUST00000207343 372 ntBASIC11.03□□□□□ -0.64
Nkd2Q8VE28 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd2Q8VE28 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd2Q8VE28 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd2Q8VE28 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd2Q8VE28 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd2Q8VE28 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd2Q8VE28 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd2Q8VE28 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd2Q8VE28 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd2Q8VE28 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd2Q8VE28 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd2Q8VE28 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Gm14263-201ENSMUST00000117955 746 ntBASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Gm12217-201ENSMUST00000118858 696 ntBASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Gm25043-201ENSMUST00000158604 212 ntBASIC11.02□□□□□ -0.65
Nkd2Q8VE28 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Gm42997-202ENSMUST00000200321 985 ntBASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd2Q8VE28 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms