Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm19459-201ENSMUST00000176240 835 ntBASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Gm44126-201ENSMUST00000204831 514 ntBASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Gm11663-201ENSMUST00000117888 290 ntBASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Gm14724-201ENSMUST00000118400 537 ntBASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx39aQ8VDW0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Mir6546-201ENSMUST00000184460 62 ntBASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx39aQ8VDW0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Gm13809-201ENSMUST00000117921 597 ntBASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Gm15610-201ENSMUST00000120584 195 ntBASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.35□□□□□ -0.27
Ddx39aQ8VDW0 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms