Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm11597-201ENSMUST00000121423 964 ntBASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm7809-201ENSMUST00000153199 742 ntBASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm27023-201ENSMUST00000182372 285 ntBASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm45784-201ENSMUST00000188360 142 ntBASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Gm5745-201ENSMUST00000183748 313 ntBASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Gm27243-201ENSMUST00000183964 521 ntBASIC11.19□□□□□ -0.62
H2afjQ8R1M2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Gm18187-201ENSMUST00000196476 984 ntBASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.19□□□□□ -0.62
H2afjQ8R1M2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afjQ8R1M2 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afjQ8R1M2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afjQ8R1M2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afjQ8R1M2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afjQ8R1M2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms