Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Ddx54Q8K4L0 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.71■□□□□ 0.1
Ddx54Q8K4L0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Ddx54Q8K4L0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.71■□□□□ 0.1
Ddx54Q8K4L0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx54Q8K4L0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx54Q8K4L0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Gm11244-201ENSMUST00000121243 237 ntBASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Gm9034-201ENSMUST00000182071 1005 ntBASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Gm7985-201ENSMUST00000183329 981 ntBASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx54Q8K4L0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Gm12337-201ENSMUST00000119634 400 ntBASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Gm13445-201ENSMUST00000121664 307 ntBASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Gm23675-201ENSMUST00000157311 125 ntBASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Gm9081-201ENSMUST00000182346 991 ntBASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Gm10263-201ENSMUST00000085163 300 ntBASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ddx54Q8K4L0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm6322-201ENSMUST00000118789 1004 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm8459-201ENSMUST00000162504 760 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm23400-201ENSMUST00000174994 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm26463-201ENSMUST00000175065 101 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm24332-201ENSMUST00000175102 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm25959-201ENSMUST00000175112 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm22475-201ENSMUST00000175169 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm22903-201ENSMUST00000175193 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm25070-201ENSMUST00000175237 102 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms