Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.35□□□□□ -0.43
CopaQ8CIE6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.35□□□□□ -0.43
CopaQ8CIE6 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.34□□□□□ -0.43
CopaQ8CIE6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm14028-201ENSMUST00000117434 479 ntBASIC12.34□□□□□ -0.43
CopaQ8CIE6 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm13315-201ENSMUST00000120376 991 ntBASIC12.34□□□□□ -0.43
CopaQ8CIE6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm26361-201ENSMUST00000158868 186 ntBASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.34□□□□□ -0.43
CopaQ8CIE6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.34□□□□□ -0.43
CopaQ8CIE6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm39404-201ENSMUST00000216350 313 ntBASIC12.34□□□□□ -0.43
CopaQ8CIE6 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopaQ8CIE6 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.33□□□□□ -0.43
CopaQ8CIE6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CopaQ8CIE6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gm14832-201ENSMUST00000121289 322 ntBASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms