Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Gm9083-201ENSMUST00000120423 819 ntBASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Gm6007-201ENSMUST00000208170 823 ntBASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc28bQ8CEG5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc28bQ8CEG5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms