Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc178Q8CDV0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc178Q8CDV0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc178Q8CDV0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc178Q8CDV0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Ccdc178Q8CDV0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.33□□□□□ -0.11
Ccdc178Q8CDV0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc178Q8CDV0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc178Q8CDV0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc178Q8CDV0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc178Q8CDV0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc178Q8CDV0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.33□□□□□ -0.11
Ccdc178Q8CDV0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc178Q8CDV0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.33□□□□□ -0.11
Ccdc178Q8CDV0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Cog3-203ENSMUST00000227473 4197 ntBASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Gm14277-201ENSMUST00000121195 360 ntBASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Gm2260-201ENSMUST00000184965 657 ntBASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc178Q8CDV0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Gm13296-201ENSMUST00000117854 997 ntBASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Gm6963-201ENSMUST00000147879 379 ntBASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Gm24990-201ENSMUST00000157406 323 ntBASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Rprl1-202ENSMUST00000198476 238 ntBASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc178Q8CDV0 Gm45224-201ENSMUST00000208203 414 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms