Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Gm43118-201ENSMUST00000199149 775 ntBASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Olfr582-201ENSMUST00000098212 960 ntBASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm12036-201ENSMUST00000120008 530 ntBASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm11793-201ENSMUST00000120433 981 ntBASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm8738-201ENSMUST00000172606 329 ntBASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm44958-201ENSMUST00000203734 736 ntBASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm5781-201ENSMUST00000219792 443 ntBASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc87Q8CDL9 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Gm15198-201ENSMUST00000117283 177 ntBASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms