Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcpip1Q8CDG3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Vcpip1Q8CDG3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm24934-201ENSMUST00000103764 111 ntBASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm27320-201ENSMUST00000184892 109 ntBASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm9136-201ENSMUST00000193368 454 ntBASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm45865-201ENSMUST00000211815 945 ntBASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms