Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Gm14441-201ENSMUST00000121960 540 ntBASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim9Q8C7M3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Gm15276-201ENSMUST00000145953 498 ntBASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Gm7584-201ENSMUST00000175829 940 ntBASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.27□□□□□ -0.29
Trim9Q8C7M3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Gm44651-201ENSMUST00000207343 372 ntBASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Gm45224-201ENSMUST00000208203 414 ntBASIC13.27□□□□□ -0.29
Trim9Q8C7M3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.27□□□□□ -0.29
Trim9Q8C7M3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim9Q8C7M3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms