Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Gm11509-201ENSMUST00000117358 325 ntBASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Gm11660-201ENSMUST00000120955 412 ntBASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Mir6927-201ENSMUST00000184494 71 ntBASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Gm3332-201ENSMUST00000189337 928 ntBASIC12.32□□□□□ -0.44
Nup54Q8BTS4 AU022133-201ENSMUST00000200601 873 ntBASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup54Q8BTS4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Rps4l-202ENSMUST00000204242 789 ntBASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Gm19208-201ENSMUST00000213861 912 ntBASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Gm9797-202ENSMUST00000218003 294 ntBASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Gm807-202ENSMUST00000224929 408 ntBASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms