Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.91□□□□□ -0.82
Smco3Q8BQM7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Syt7-204ENSMUST00000223586 1344 ntBASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm24231-201ENSMUST00000104315 133 ntBASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm7558-201ENSMUST00000193221 1165 ntBASIC9.91□□□□□ -0.82
Smco3Q8BQM7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.91□□□□□ -0.82
Smco3Q8BQM7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco3Q8BQM7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Btrc-209ENSMUST00000224478 2194 ntBASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Smco3Q8BQM7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco3Q8BQM7 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Smco3Q8BQM7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco3Q8BQM7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco3Q8BQM7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco3Q8BQM7 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco3Q8BQM7 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms