Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.84□□□□□ -0.19
VmacQ8BP01 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
VmacQ8BP01 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
VmacQ8BP01 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VmacQ8BP01 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.83□□□□□ -0.19
VmacQ8BP01 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.83□□□□□ -0.19
VmacQ8BP01 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VmacQ8BP01 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
VmacQ8BP01 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.83□□□□□ -0.19
VmacQ8BP01 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VmacQ8BP01 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VmacQ8BP01 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VmacQ8BP01 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Gm2553-201ENSMUST00000215986 605 ntBASIC13.83□□□□□ -0.2
VmacQ8BP01 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.83□□□□□ -0.2
VmacQ8BP01 Gm9257-201ENSMUST00000221254 232 ntBASIC13.83□□□□□ -0.2
VmacQ8BP01 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
VmacQ8BP01 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.83□□□□□ -0.2
VmacQ8BP01 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Cog3-203ENSMUST00000227473 4197 ntBASIC13.83□□□□□ -0.2
VmacQ8BP01 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VmacQ8BP01 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VmacQ8BP01 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.82□□□□□ -0.2
VmacQ8BP01 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.82□□□□□ -0.2
VmacQ8BP01 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
VmacQ8BP01 Gm23949-201ENSMUST00000104027 127 ntBASIC13.82□□□□□ -0.2
VmacQ8BP01 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
VmacQ8BP01 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VmacQ8BP01 Gm12380-201ENSMUST00000119012 544 ntBASIC13.82□□□□□ -0.2
VmacQ8BP01 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.82□□□□□ -0.2
VmacQ8BP01 Mir7677-201ENSMUST00000184226 67 ntBASIC13.82□□□□□ -0.2
VmacQ8BP01 Gm28071-201ENSMUST00000190355 478 ntBASIC13.82□□□□□ -0.2
VmacQ8BP01 Gm7003-201ENSMUST00000195089 312 ntBASIC13.82□□□□□ -0.2
VmacQ8BP01 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.82□□□□□ -0.2
VmacQ8BP01 Gm45186-201ENSMUST00000206874 478 ntBASIC13.82□□□□□ -0.2
VmacQ8BP01 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
VmacQ8BP01 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.82□□□□□ -0.2
VmacQ8BP01 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VmacQ8BP01 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VmacQ8BP01 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.82□□□□□ -0.2
VmacQ8BP01 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Pck2-205ENSMUST00000226352 2784 ntBASIC13.82□□□□□ -0.2
VmacQ8BP01 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VmacQ8BP01 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.81□□□□□ -0.2
VmacQ8BP01 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VmacQ8BP01 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VmacQ8BP01 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VmacQ8BP01 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 181.9 ms