Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp54Q8BL06 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Gm14274-201ENSMUST00000117182 615 ntBASIC16.83■□□□□ 0.28
Usp54Q8BL06 Gm11560-201ENSMUST00000117567 948 ntBASIC16.83■□□□□ 0.28
Usp54Q8BL06 Gm12663-201ENSMUST00000118481 958 ntBASIC16.83■□□□□ 0.28
Usp54Q8BL06 Gm11979-201ENSMUST00000119629 743 ntBASIC16.83■□□□□ 0.28
Usp54Q8BL06 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Gm7719-201ENSMUST00000182374 975 ntBASIC16.83■□□□□ 0.28
Usp54Q8BL06 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 AC158392.3-201ENSMUST00000224271 1284 ntBASIC16.83■□□□□ 0.28
Usp54Q8BL06 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Gm5434-202ENSMUST00000222384 1451 ntBASIC16.83■□□□□ 0.28
Usp54Q8BL06 Gm5434-201ENSMUST00000071825 1451 ntBASIC16.83■□□□□ 0.28
Usp54Q8BL06 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp54Q8BL06 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm25148-201ENSMUST00000104611 123 ntBASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm11619-201ENSMUST00000117474 237 ntBASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp54Q8BL06 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm26976-201ENSMUST00000182929 908 ntBASIC16.82■□□□□ 0.28
Usp54Q8BL06 Mir6923-201ENSMUST00000184592 72 ntBASIC16.82■□□□□ 0.28
Usp54Q8BL06 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm42655-201ENSMUST00000202782 1134 ntBASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm5599-201ENSMUST00000209602 788 ntBASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm6390-201ENSMUST00000215034 589 ntBASIC16.82■□□□□ 0.28
Usp54Q8BL06 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm40879-201ENSMUST00000220759 612 ntBASIC16.82■□□□□ 0.28
Usp54Q8BL06 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 AC138329.2-201ENSMUST00000225579 1842 ntBASIC16.82■□□□□ 0.28
Usp54Q8BL06 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Rab3c-202ENSMUST00000223922 2398 ntBASIC16.82■□□□□ 0.28
Usp54Q8BL06 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp54Q8BL06 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Gm11578-201ENSMUST00000118530 459 ntBASIC16.81■□□□□ 0.28
Usp54Q8BL06 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Gm24791-201ENSMUST00000104284 131 ntBASIC16.81■□□□□ 0.28
Usp54Q8BL06 Gm13019-201ENSMUST00000120000 276 ntBASIC16.81■□□□□ 0.28
Usp54Q8BL06 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Usp54Q8BL06 AC130477.1-201ENSMUST00000226982 420 ntBASIC16.81■□□□□ 0.28
Usp54Q8BL06 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp54Q8BL06 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms