Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Gm25261-201ENSMUST00000157416 134 ntBASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Gm42937-201ENSMUST00000197360 752 ntBASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chmp2bQ8BJF9 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Gm14999-201ENSMUST00000121039 624 ntBASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2bQ8BJF9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms