Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Gm22323-201ENSMUST00000103832 109 ntBASIC11.66□□□□□ -0.54
Trim36Q80WG7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.66□□□□□ -0.54
Trim36Q80WG7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim36Q80WG7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim36Q80WG7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.66□□□□□ -0.54
Trim36Q80WG7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim36Q80WG7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.65□□□□□ -0.54
Trim36Q80WG7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gm24231-201ENSMUST00000104315 133 ntBASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gm24255-201ENSMUST00000104481 128 ntBASIC11.65□□□□□ -0.54
Trim36Q80WG7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Rmrp-201ENSMUST00000157463 271 ntBASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gm24548-201ENSMUST00000158650 108 ntBASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gm5781-201ENSMUST00000219792 443 ntBASIC11.65□□□□□ -0.54
Trim36Q80WG7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.65□□□□□ -0.54
Trim36Q80WG7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim36Q80WG7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim36Q80WG7 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.55
Trim36Q80WG7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim36Q80WG7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim36Q80WG7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim36Q80WG7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trim36Q80WG7 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim36Q80WG7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim36Q80WG7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim36Q80WG7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trim36Q80WG7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim36Q80WG7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim36Q80WG7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim36Q80WG7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms