Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Map1b-203ENSMUST00000223725 2669 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Gm11511-201ENSMUST00000118146 540 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Gm5616-201ENSMUST00000165252 384 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Gm8741-201ENSMUST00000174736 384 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Gm18893-201ENSMUST00000198416 943 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 AY036118-201ENSMUST00000200021 923 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Gm8956-201ENSMUST00000203939 825 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Gm44262-201ENSMUST00000204969 372 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Gm4607-201ENSMUST00000206649 577 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Exosc3Q7TQK4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
Exosc3Q7TQK4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gm22133-201ENSMUST00000102082 109 ntBASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gm27627-201ENSMUST00000183644 150 ntBASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Exosc3Q7TQK4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Exosc3Q7TQK4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Exosc3Q7TQK4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Exosc3Q7TQK4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms