Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Gm19287-201ENSMUST00000203190 358 ntBASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Gm9132-201ENSMUST00000210182 832 ntBASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox11Q7M6Y2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Gm37905-201ENSMUST00000195310 341 ntBASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox11Q7M6Y2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Gm11675-201ENSMUST00000121873 832 ntBASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.23□□□□□ -0.45
Sox11Q7M6Y2 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms