Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casc4Q6P2L7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casc4Q6P2L7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Casc4Q6P2L7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gm23912-201ENSMUST00000104687 87 ntBASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gm25700-201ENSMUST00000177693 110 ntBASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gm4034-201ENSMUST00000187674 480 ntBASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gm9230-201ENSMUST00000188228 532 ntBASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gm38317-201ENSMUST00000195564 343 ntBASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gm19187-201ENSMUST00000206781 892 ntBASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gm44651-201ENSMUST00000207343 372 ntBASIC12.23□□□□□ -0.45
Casc4Q6P2L7 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casc4Q6P2L7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.22□□□□□ -0.45
Casc4Q6P2L7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Gm6963-201ENSMUST00000147879 379 ntBASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 AA914427-201ENSMUST00000193194 1166 ntBASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Gm35960-201ENSMUST00000202712 767 ntBASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Gm45224-201ENSMUST00000208203 414 ntBASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms