Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gm13035-201ENSMUST00000117496 342 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gm12857-201ENSMUST00000117678 592 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.53□□□□□ -0.4
Smarcd1Q61466 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Gm14058-201ENSMUST00000116082 735 ntBASIC12.53□□□□□ -0.4
Smarcd1Q61466 Gm14724-201ENSMUST00000118400 537 ntBASIC12.53□□□□□ -0.4
Smarcd1Q61466 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.53□□□□□ -0.4
Smarcd1Q61466 Gm12566-201ENSMUST00000121479 359 ntBASIC12.53□□□□□ -0.4
Smarcd1Q61466 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.53□□□□□ -0.4
Smarcd1Q61466 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Gm28686-201ENSMUST00000187404 609 ntBASIC12.53□□□□□ -0.4
Smarcd1Q61466 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.53□□□□□ -0.4
Smarcd1Q61466 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Smarcd1Q61466 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.53□□□□□ -0.4
Smarcd1Q61466 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.53□□□□□ -0.4
Smarcd1Q61466 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd1Q61466 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd1Q61466 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd1Q61466 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Smarcd1Q61466 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.52□□□□□ -0.4
Smarcd1Q61466 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Smarcd1Q61466 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Smarcd1Q61466 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd1Q61466 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd1Q61466 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd1Q61466 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms