Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.23□□□□□ -0.29
Col11a1Q61245 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm24992-201ENSMUST00000157412 130 ntBASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC13.23□□□□□ -0.29
Col11a1Q61245 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm2594-201ENSMUST00000214774 742 ntBASIC13.23□□□□□ -0.29
Col11a1Q61245 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.22□□□□□ -0.29
Col11a1Q61245 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Gm14071-201ENSMUST00000117817 509 ntBASIC13.22□□□□□ -0.29
Col11a1Q61245 Gm12418-201ENSMUST00000118116 942 ntBASIC13.22□□□□□ -0.29
Col11a1Q61245 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC13.22□□□□□ -0.29
Col11a1Q61245 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col11a1Q61245 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Col11a1Q61245 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col11a1Q61245 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.21□□□□□ -0.29
Col11a1Q61245 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col11a1Q61245 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Gm24328-201ENSMUST00000175104 67 ntBASIC13.21□□□□□ -0.29
Col11a1Q61245 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Gm5267-201ENSMUST00000191574 1045 ntBASIC13.21□□□□□ -0.29
Col11a1Q61245 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.21□□□□□ -0.29
Col11a1Q61245 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.21□□□□□ -0.29
Col11a1Q61245 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col11a1Q61245 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col11a1Q61245 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col11a1Q61245 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col11a1Q61245 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col11a1Q61245 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Col11a1Q61245 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col11a1Q61245 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.21□□□□□ -0.3
Col11a1Q61245 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.21□□□□□ -0.3
Col11a1Q61245 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col11a1Q61245 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col11a1Q61245 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col11a1Q61245 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col11a1Q61245 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Col11a1Q61245 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms