Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Gm18473-201ENSMUST00000220543 868 ntBASIC12.85□□□□□ -0.35
Foxd4Q60688 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.85□□□□□ -0.35
Foxd4Q60688 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Foxd4Q60688 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Foxd4Q60688 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Foxd4Q60688 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Foxd4Q60688 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Foxd4Q60688 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Foxd4Q60688 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.84□□□□□ -0.35
Foxd4Q60688 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.84□□□□□ -0.35
Foxd4Q60688 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Proscos-202ENSMUST00000178990 666 ntBASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Foxd4Q60688 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.84□□□□□ -0.35
Foxd4Q60688 AC164597.2-201ENSMUST00000226738 603 ntBASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Foxd4Q60688 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Foxd4Q60688 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Foxd4Q60688 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Foxd4Q60688 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Foxd4Q60688 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Foxd4Q60688 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Foxd4Q60688 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Foxd4Q60688 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Foxd4Q60688 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Foxd4Q60688 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm11814-201ENSMUST00000119515 929 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm11803-201ENSMUST00000119966 444 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm13123-201ENSMUST00000122173 492 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm20574-201ENSMUST00000182867 917 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm27731-201ENSMUST00000185192 107 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm28693-202ENSMUST00000190758 331 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms